Mouse testis single cell rnaseq atlas

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August undefined, 2024

NettetIn MCA 3.0 (Mouse Cell Development and Ageing Atlas), we analysed ~1,130,000 single cells from >10 mouse tissues (2-4 replicates per tissue in general) at ten life stages … NettetSingle Cell Expression Atlas supports research in single cell transcriptomics. The Atlas annotates publicly available single cell RNA-Seq experiments with ontology identifiers …

A single-cell atlas of the mouse and human prostate reveals ...

Nettet11. sep. 2024 · To examine cellular heterogeneity, we performed single-cell RNA-sequencing of whole prostates from adult wild-type mice at 10 weeks of age. We … http://bis.zju.edu.cn/MCA/ flbh login

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Nettet17. feb. 2012 · This is currently not the case for most biomedical researchers. We therefore created the RNA-Seq Atlas, a database and user interface (UI) providing easy access to NGS data. Currently, RNA-Seq Atlas holds gene expression profiles on eleven human, healthy tissues and can be accessed over an intuitive web interface. Nettet1. aug. 2024 · To address this challenge, we collected single-cell RNA sequencing data from ∼35,000 cells from the adult mouse testis and identified all known germ and somatic cells, as well as two unexpected ... Nettet16. aug. 2024 · The testis is a peculiar tissue in many respects. It shows patterns of rapid gene evolution and provides a hotspot for the origination of genetic novelties such as … cheesecake by james joliet il

Mouse aging cell atlas analysis reveals global and cell type …

Cell Types Database: RNA-Seq Data - brain-map.org - Allen Brain …

Nettet4. apr. 2024 · It allows users to define the expression profile of interest by specifying up to 10 anatomical structures and whether expression is present or absent in these structures. It can be found as a tab on the Gene Expression Data Query. GXD now includes RNA-seq data. GXD has been expanded to include RNA-Seq data. NettetSingle Cell RNAseq Testis Atlas. This repository contains the code used to analyse the data for the paper "Unified single-cell analysis of testis gene regulation and pathology … cheesecake cafeNettet24. jun. 2024 · For every day of cortex development, the researchers analyzed the brain using multiple technologies at the single-cell level. They used RNA-seq to measure which genes are expressed, as well as spatial transcriptomics to measure where genes are expressed in the tissue. They also used ATAC-seq to measure which parts of the … cheesecake by james joliet il menu

"NettetThe Human Disease Blood Atlas contains information on the protein levels in blood in patients with different diseases, as well as, the panels of proteins associated with the … " - Mouse testis single cell rnaseq atlas

Mouse testis single cell rnaseq atlas

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult ...

Nettet11. sep. 2024 · To examine cellular heterogeneity, we performed single-cell RNA-sequencing of whole prostates from adult wild-type mice at 10 weeks of age. We microdissected the full proximal-distal extent of each prostate lobe down to its junction with the urethral epithelium (Figure 1—figure supplement 1A–C).We noted that the … Nettet10. sep. 2024 · Figure 7. Summary Schematic of the Comprehensive Cellular Atlas of Mouse Spermatogenesis and Testis Niche. Overview of the major findings from the …

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NettetSingle cell (or single nucleus) RNA sequencing (RNA-Seq) is a scalable approach to provide genome-wide expression profiles for thousands of cells. This data set includes … Nettet16. mar. 2024 · Single-cell RNAseq (scRNAseq) is a powerful tool to determine granularity of gene expression at the population level. To assess how organ signatures are reflected in freshly isolated fibroblasts, we reanalyzed the stromal cell dataset from a publicly available multiorgan scRNAseq study (the Mouse Cell Atlas) (Han et al., 2024).

NettetThe team is using drop-seq technique and isoform data analysis on single cell RNASeq data for normal breast cells, breast cancer cells, and other types of cancer cells. To unravel the molecular program of spermatogenesis, the team has adopted the drop-seq technique and has been collecting single cell data from the adult testis of mouse, … Nettet15. des. 2024 · Abstract. Lung organogenesis requires precise timing and coordination to effect spatial organization and function of the parenchymal cells. To provide a …

NettetSingle-Cell RNAseq Resolve the Potential Effects of LanCL1 Gene in the Mouse Testis Jiangting Lu 1,† , Jinling Liao 2,† , Min Qin 3,† , Hui Li 1 , Qingyuan Zhang 1 , Yang Chen 1,2, * and ... http://www.informatics.jax.org/expression.shtml

Nettet7. mai 2024 · We examined Znrf3 expression in somatic (Sf1(Nr5a1)-positive) cells of the developing XY and XX gonads between 10.5 and 16.5 dpc using single-cell RNA sequencing (sc-RNAseq) (SI Appendix, Fig. S1). This revealed early Znrf3 expression in progenitor cells and supporting cells in both sexes, but with no significant sexual …

Nettet1065475 Cells. Welcome to the soon-to-be home of the Macosko mouse brain atlas, published in our bioRxiv: The cell type composition of the adult mouse brain revealed … cheesecake cabin edison ohioNettet12. des. 2024 · Gene functionality is closely connected to its expression specificity across tissues and cell types. RNA-Seq is a powerful quantitative tool to explore genome wide … cheesecake cafe lethbridgeNettet11. sep. 2024 · Single-cell RNA sequencing of adult mouse testes. Soeren Lukassen, Elisabeth Bosch, Arif B. Ekici &. Andreas Winterpacht. Scientific Data 5, Article number: … flbigroupNettetCell line Any A-431 A-549 AF22 ASC52telo BJ [Human fibroblast] CACO-2 EFO-21 FHDF/TERT166 GAMG HaCaT HAP1 HBEC3-KT HBF/TERT88 HDLM-2 HEK293 HEL HeLa Hep-G2 HTCEpi HTEC/SVTERT24-B HTERT-HME1 HTERT-RPE1 HTERT-RPE1 (serum starved) HUVEC/TERT2 JURKAT K-562 LHCN-M2 MCF-7 NB4 OE19 PC-3 … cheesecake by postNettetMale germ cell development requires intricate interplay between mitotic, meiotic, and differentiating germ cells and supporting somatic cells. Green et al. apply single-cell … cheesecake cafe albertaNettetCell line Any A-431 A-549 AF22 ASC52telo BJ [Human fibroblast] CACO-2 EFO-21 FHDF/TERT166 GAMG HaCaT HAP1 HBEC3-KT HBF/TERT88 HDLM-2 HEK293 HEL HeLa Hep-G2 HTCEpi HTEC/SVTERT24-B HTERT-HME1 HTERT-RPE1 HTERT-RPE1 (serum starved) HUVEC/TERT2 JURKAT K-562 LHCN-M2 MCF-7 NB4 OE19 PC-3 … cheese cake cafe edmontonNettetInteractively explore gene expression in the mouse testis as single cell resolution using this Shiny web app by Jung & Wells et. al. cheesecake by sam